# Tools for Working with Points and Intervals

## Documentation for package ‘intervals’ version 0.15.5

- DESCRIPTION file.
- User guides, package vignettes and other documentation.
- Package NEWS.

## Help Pages

intervals-package | Tools for working with points and intervals
adjust_closure | Re-represent integer intervals with open or closed endpoints
adjust_closure-method | Re-represent integer intervals with open or closed endpoints
as.matrix | Extract matrix of endpoints
as.matrix-method | Extract matrix of endpoints
as.matrix.Intervals_virtual | Extract matrix of endpoints
c | Combine different interval matrix objects
c.Intervals | Combine different interval matrix objects
c.Intervals_full | Combine different interval matrix objects
closed | Class "Intervals_virtual"
closed-method | Class "Intervals_virtual"
closed<- | Classes "Intervals" and "Intervals_full"
closed<--method | Classes "Intervals" and "Intervals_full"
close_intervals | Re-represent integer intervals with open or closed endpoints
close_intervals-method | Re-represent integer intervals with open or closed endpoints
clusters | Identify clusters in a collection of positions or intervals
clusters-method | Identify clusters in a collection of positions or intervals
coerce-method | Classes "Intervals" and "Intervals_full"
coerce-method | Class "Intervals_virtual"
contract | Expand or contract intervals
contract-method | Expand or contract intervals
distance_to_nearest | Compute distance to nearest position in a set of intervals
distance_to_nearest-method | Compute distance to nearest position in a set of intervals
empty | Identify empty interval rows
empty-method | Identify empty interval rows
expand | Expand or contract intervals
expand-method | Expand or contract intervals
head-method | Class "Intervals_virtual"
initialize-method | Classes "Intervals" and "Intervals_full"
initialize-method | Class "Intervals_virtual"
Intervals | Classes "Intervals" and "Intervals_full"
intervals | Tools for working with points and intervals
Intervals-class | Classes "Intervals" and "Intervals_full"
Intervals_full | Classes "Intervals" and "Intervals_full"
Intervals_full-class | Classes "Intervals" and "Intervals_full"
Intervals_virtual-class | Class "Intervals_virtual"
Intervals_virtual_or_numeric-class | Class "Intervals_virtual_or_numeric"
interval_complement | Compute the complement of a set of intervals
interval_complement-method | Compute the complement of a set of intervals
interval_difference | Compute set difference
interval_difference-method | Compute set difference
interval_included | Assess inclusion of one set of intervals with respect to another
interval_included-method | Assess inclusion of one set of intervals with respect to another
interval_intersection | Compute the intersection of one or more sets of intervals
interval_intersection-method | Compute the intersection of one or more sets of intervals
interval_overlap | Assess overlap from one set of intervals to another
interval_overlap-method | Assess overlap from one set of intervals to another
interval_union | Compute the union of intervals in one or more interval matrices
interval_union-method | Compute the union of intervals in one or more interval matrices
is.na-method | Class "Intervals_virtual"
open_intervals | Re-represent integer intervals with open or closed endpoints
open_intervals-method | Re-represent integer intervals with open or closed endpoints
plot | Plotting methods for interval objects
plot-method | Plotting methods for interval objects
plot.Intervals | Plotting methods for interval objects
plot.Intervals_full | Plotting methods for interval objects
reduce | Compactly re-represent the points in a set of intervals
reduce-method | Compactly re-represent the points in a set of intervals
sgd | Yeast gene model sample data
show-method | Class "Intervals_virtual"
size | Compute interval sizes
size-method | Compute interval sizes
split | Split an intervals object according to a factor
split-method | Split an intervals object according to a factor
split.Intervals_virtual | Split an intervals object according to a factor
t-method | Class "Intervals_virtual"
tail-method | Class "Intervals_virtual"
type | Class "Intervals_virtual"
type-method | Class "Intervals_virtual"
type<- | Class "Intervals_virtual"
type<--method | Class "Intervals_virtual"
which_nearest | Identify nearest member(s) in a set of intervals
which_nearest-method | Identify nearest member(s) in a set of intervals
[-method | Classes "Intervals" and "Intervals_full"
[<--method | Classes "Intervals" and "Intervals_full"